Table 3 Overview of LEfSe analysis results
From: Plant nickel-exclusion versus hyperaccumulation: a microbial perspective
Speciesa | Kingdom | Compartment | Number of biomarkersb | Number of "unclassified" biomarkers | LDA score range |
|---|---|---|---|---|---|
Pg (Ni-HA) | Bacteria | Seeds | 1 (2.0%) | 0 | 5.3 |
Pulps | 2 (4.1%) | 0 | 5.5–5.7 | ||
Leaves | 11 (22.4%) | 5 (45.5%) | 4.2–5.0 | ||
Roots | 18 (36.7%) | 9 (50.0%) | 4.1–4.9 | ||
Rhizospheric soil | 17 (34.7%) | 12 (70.6%) | 4.0–4.9 | ||
Summary | 49 (100.0%) | 26 (53.1%) | 4.0–5.7 | ||
Fungi | Seeds | 0 | 0 | Â | |
Pulps | 7 (9.0%) | 3 (42.9%) | 4.0–5.3 | ||
Leaves | 34 (43.6%) | 6 (17.6%) | 3.1–5.6 | ||
Roots | 19 (24.4%) | 9 (47.4%) | 3.2–5.2 | ||
Rhizospheric soil | 18 (23.1%) | 7 (38.9%) | 3.4–5.2 | ||
Summary | 78 (100.0%) | 25 (32.1%) | 3.1–5.6 | ||
Ps (nA) | Bacteria | Seeds | 2 (2.7%) | 1 (50.0%) | 4.8–5.6 |
Pulps | 6 (8.1%) | 2 (33.3%) | 4.2–5.1 | ||
Leaves | 11 (14.9%) | 4 (36.4%) | 3.6–4.5 | ||
Roots | 14 (18.9%) | 8 (57.1%) | 3.8–4.8 | ||
Rhizospheric soil | 41 (55.4%) | 31 (75.6%) | 3.7–4.7 | ||
Summary | 74 (100.0%) | 46 (62.2%) | 3.6–5.6 | ||
Fungi | Seeds | 3 (2.4%) | 1 (33.3%) | 4.60–5.63 | |
Pulps | 12 (9.5%) | 2 (16.7%) | 3.95–4.90 | ||
Leaves | 61 (48.4%) | 10 (16.4%) | 2.88–4.57 | ||
Roots | 34 (27.0%) | 14 (41.2%) | 3.02–5.25 | ||
Rhizospheric soil | 16 (12.7%) | 6 (37.5%) | 3.30–4.87 | ||
Summary | 126 (100.0%) | 33 (26.2%) | 2.88–5.63 |