Table 1 Significance of factors in describing the variation in bacterial communities between samples. Values highlighted in bold have a significant p-value
All samples | Df | SumsOfSqs | MeanSqs | F.Model | R2 | Pr(> F) |
|---|---|---|---|---|---|---|
Inoculation day | 3 | 6874.932 | 2291.644 | 5.541 | 0.069 | 0.001 |
Sampling day | 3 | 4548.360 | 1516.120 | 3.666 | 0.046 | 0.001 |
Ecotype | 2 | 3040.552 | 1520.276 | 3.676 | 0.031 | 0.001 |
Inoculation Day x Sampling Day | 8 | 5076.620 | 634.578 | 1.534 | 0.051 | 0.001 |
Inoculation Day x Ecotype | 6 | 3881.837 | 646.973 | 1.564 | 0.039 | 0.001 |
Sampling Day x Ecotype | 6 | 2623.928 | 437.321 | 1.057 | 0.026 | 0.258 |
Inoculation Day x Sampling Day x Ecotype | 15 | 6518.662 | 434.577 | 1.051 | 0.065 | 0.206 |
Residuals | 162 | 67,004.491 | 413.608 | NA | 0.673 | NA |
Total | 205 | 99,569.383 | NA | NA | 1.000 | NA |
Col-0 samples | ||||||
Inoculation day | 3 | 4473.145 | 1491.048 | 3.942 | 0.140 | 0.001 |
Sampling day | 3 | 2092.279 | 697.426 | 1.844 | 0.066 | 0.001 |
Inoculation Day x Sampling Day | 8 | 3348.026 | 418.503 | 1.107 | 0.105 | 0.125 |
Residuals | 58 | 21,936.765 | 378.220 | NA | 0.689 | NA |
Total | 72 | 31,850.215 | NA | NA | 1.000 | NA |
NG-2 samples | ||||||
Inoculation day | 3 | 2464.503 | 821.501 | 2.349 | 0.106 | 0.001 |
Sampling day | 3 | 1869.486 | 623.162 | 1.782 | 0.080 | 0.001 |
Inoculation day x sampling day | 8 | 3238.656 | 404.832 | 1.158 | 0.139 | 0.043 |
Residuals | 45 | 15,736.407 | 349.698 | NA | 0.675 | NA |
Total | 59 | 23,309.053 | NA | NA | 1.000 | NA |
PB samples | ||||||
inoculation day | 3 | 3163.243 | 1054.414 | 2.588 | 0.094 | 0.001 |
sampling day | 3 | 2753.465 | 917.822 | 2.253 | 0.082 | 0.001 |
inoculation day x sampling day | 7 | 3732.816 | 533.259 | 1.309 | 0.111 | 0.005 |
residuals | 59 | 24,036.932 | 407.406 | NA | 0.714 | NA |
Total | 72 | 33,686.457 | NA | NA | 1.000 | NA |