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Fig. 1 | Microbiome

Fig. 1

From: Shotgun metagenomic sequencing reveals the influence of artisanal dairy environments on the microbiomes, quality, and safety of Idiazabal, a raw ewe milk PDO cheese

Fig. 1

Characteristics of shotgun metagenomic sequencing data, and alpha and beta diversity analyses. Boxplot representation of average raw reads, post-quality control (postQC) reads, and microbial reads obtained from dairy and environmental samples (A), boxplot representation of average microbial reads obtained from dairy and environmental samples according to the producer (B), boxplot representation of microbial reads according to the sample type (dairy and environmental) (C), α-diversity indices calculated for dairy and environmental samples (D) and PCoA of β-diversity of dairy and environmental samples (E). Abbreviations: B: brine, C: cheese, CF: commercial feed, FC: food contact surfaces, G: grass, HF: home-made feed, NFC: non-food contact surfaces, R: rennet, RM: raw milk, S: straw, TS: teat skin surface, W: whey

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Microbiome

ISSN: 2049-2618

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