Fig. 6

Numbers of protein groups (PGs) with increased or decreased abundance according to within- and between-group comparisons. These PGs were determined by LFQ analysis and are shown with the most representative COG categories and KEGG pathways. To simplify the figure, if the algorithm assigned the LCA at the species level, the corresponding genus is displayed. Colors indicate the LCA assigned to the peptide sequence. A Within-group analysis comparing baseline and week 8 data. B Comparison of ileal CD (L1) and colonic and ileocolonic CD (L2 + L3) groups with the HHC group. C Comparisons between and within groups of patients stratified by disease location