Linking morphology, genome, and metabolic activity of uncultured magnetotactic Nitrospirota at the single-cell level

Table 1 Genome statistics of draft genomes reconstructed from different numbered cells of ‘Candidatus Magnetobacterium’ sp. LHC-1

Parameter	Groups of LHC-1 cells with different numbers
Parameter	1 cell	5 cells	10 cells^a	20 cells	50 cells	100 cells
Genome size (Mbp)	1.08	0.21	4.08	3.55	3.85	3.84
No. of scaffolds	140	31	283	345	150	295
N50 (kb)	11.009	7.250	22.734	14.774	41.955	20.486
GC content (%)	30.71	30.81	48.69	49.18	48.89	49.00
CheckM completeness (%)	1.72	7.76	94.83	83.07	86.21	84.33
CheckM contamination (%)	0	0.86	0	0.86	0	0
CheckM2 completeness (%)	22.8	16.29	98.73	82.55	88.92	91.18
CheckM2 contamination (%)	4.97	0.15	0.24	0.6	0.32	0.44
BUSCO completeness (%)	0.8	0	90.3	77.4	87.1	87.1
BUSCO contamination (%)	0	0	0	0	0	0
No. of coding sequence (CDS)	1250	261	3764	3272	3526	3583
No. of tRNAs	1	4	21	18	19	21
The presence of the 23S, 16S, and 5S rRNA genes^b	False	False	True	False	True	True

^aThis genome sequence was selected for in-depth phylogenomic, genomic, and metabolic analyses
^bGenome that encodes all 23S, 16S, and 5S rRNA genes is marked as true; if any of these rRNA genes is missing, then marked as false

ISSN: 2049-2618